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Bookmark or Share- 使用JASPAR预测转录因子结合位点 - 知乎 - 知乎专栏JASPAR数据库简介. JASPAR是一个开源的转录因子结合位点信息数据库，以position frequency matrices (PFMs) 和TF flexible models（TFFMs）的形式记录了6大类物种的转录因子的DNA结合偏好信息。这些信息可以转换为位置权重矩阵（Position Weight Matrices，PWMs），可用于扫描基因组序列。
- JASPAR - A database of transcription factor binding profilesJASPAR is an open-access database of curated, non-redundant transcription factor (TF) binding profiles stored as position frequency matrices (PFMs) and TF flexible models (TFFMs) for TFs across multiple species in six taxonomic groups. You are viewing data from the 10th release (2024) of JASPAR.
- JASPAR - A database of transcription factor binding profilesJASPAR is an open-access database of curated, non-redundant transcription factor (TF) binding profiles stored as position frequency matrices (PFMs) and TF flexible models (TFFMs) for TFs across multiple species in six taxonomic groups. You are viewing data from the 8th release (2020) of JASPAR.
- JASPAR - DocumentationLast updated: 15 Sep. 2021. JASPAR is a regularly maintained open-access database storing manually curated TF binding preferences as position frequency matrices (PFMs). PFMs summarize occurrences of each nucleotide at each position in a set of observed TF-DNA interactions. PFMs can be transformed to probabilistic models to construct position ...
- JASPAR - Tools - gene regJASPAR software tools. JASPAR is supported by a growing number of open source software tools and APIs implemented in various programming languages including Perl, Python/Biopython, R/Bioconductor and Ruby. In addition, the TFBS enrichment tool was introduced in the 2022 release.
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